Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904735.1_cds_XP_016454859.1_48841
CDS Infomation

[gene=LOC107779033] [db_xref=GeneID:107779033] [protein=replication protein A 70 kDa DNA-binding subunit A-like isoform X3] [protein_id=XP_016454859.1] [location=join(107678..107937,109144..110593,110641..110850)] [gbkey=CDS]
Sequence

ATGCCTGTGAACTTGACTGCAAACGCGATCCCGGCGATAATCGCCGGCGACGTGAACTCA
AAGCCAGTGGTTCAGGTATTGGACATCAAGCTAATTGGCGCCGCAGCGGATCGGTACGGA
CTCCTAATCTCAGATTCTGAGTCGAGTCAGCAGGCTATGCTGGCTGCTCAGCTTAATGAC
CGAGTCAAAACTGGCCGCGTTCGCAAAACCTCCGTCATTCAGTTGATTGAGTACATCTGT
ACCACTGTTAAAAATCGCAAAATTATTGTTGTCATCAACATGGAAACTATTATACCAGAA
TGTGAAATAATTGGGAATCCTAAAGTGCTTGTAGAATCTAATTTTGGAGCTCAGAAAGCT
ATATCTAATGGCATTTCTGGGTCTGCAATCTTTAACAATGGTAACTTGAGTGCTCAAAGA
TCTGGCCAAACAAGCTTTGCTAACAGCAACAATTTGAGCTCCCTAAATTCAGGTAATAGC
ATGCAGAGCTACCCACCTGCAATTCAACCCGCATATCAACCTCCTCCAAATTACAAAAGC
CATGGGACAATAATGAAGAATGAAGCACCTGCCCGCATTATTCCAATAGCTGCTTTGAAC
CCCTATCAGGGTCGGTGGGCTATTAAGGCTAGAGTGACTGCAAAGGGGGATCTACGTCGC
TATAATAATTCCAGAGGAGATGGAAAGGTCTTCTCATTTGATCTCCTTGACTCTGATGGG
GGTGAAATACGTGTCACTTGCTTTAATGCGGTTGTTGATCGCTTTTATGACAAAATTGAA
GCTGGAAAAGTGTACATGATATCAAAAGGCAGCTTGAAACCTGCTCAAAAGAACTTCAAC
CATCTGAAGAATGAATGGGAAATATTCTTGGAGATAACTTCAACTGTAGATCTCTGTCCA
GATGAAGATAACACTATACCAAGACAGCAGTTCTCATTTAGACCTATTAGTGACATTGAA
AGTGCAGAAAGCAATTCAATCATAGATGTGATTGGAATTGTAATAGCTGTCAATCCTTCT
GTTCTGATCCTGAGAAAGAATGGAATGGAAACTCAAAGAAGAATCTTGAATCTAAAGGAT
CAGTCTGGGCGAAGTGTTGAGCTGACGCTATGGGGAGACTTCTGCAACAGGGAAGGTCAA
AAGCTGCAAGAAATGGCAGAAGCTGGGTTTTCCCCTGTTTTAGCTGTCAAAGCTGCAAAA
GTTAGTGACTTCACTGGGAAATCCATTGGAACCATTTCTTCCACTCAACTGTTCATAGGT
CCAGATTTTGCAGAGGCTCAGACTCTAAGAGAATGGTTTGATCAGGGAGGAAAAGATGTT
GCTTCTCAATCTATATCTAGGGAAAACATGCCTGTAGGATCAAAAAGTGAGATACGCAAG
ACCGTGTCTCGGATCAAGGATGAAGGGCTTGGTAGGTCAGATAAACCAGACTGGATTACA
GTTAAGGCAACTATAACATTCATCAAAACCGACAGCTTCTATTACACTGCTTGCCCTCTG
ATGATTGGAGATAGACAATGTAATAAGAAAGTTACCAGGTCAGGAAACTCGAGATGGCAA
TGTGATAGGTGCAATCAAGAGTTTGAGGAATGTGATTACAGATACCTTCTTCAAGCTCAA
ATTCAAGATCATACTGGGTTGACATGGGTGACAGCTTTCCAGGAATCTGGGGAAGAGATT
TTGGGTCGTCCCGCAAAGGAGCTACACATGATGATGAATGAAGAGGCTGATGATACCAGA
TTTTCTGAAATTATTAGAAAATGTCTCTTTACACAATTTCTATTCAGGCTTAAAATCAAA
GAGGAACTTTATGGTGATGAGCAGAAGGTGAAGATTACAGTTATCAAGGCAGAGAAAGTG
AAACATTCTGCAGAAAGCAGATATCTCCTTGATTTAATTTCAAAATTCCGTTCTTCATGA

Peptide Sequence

PEP ID

XP_016454859.1
PEP Infomation

PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like isoform X3 [Nicotiana tabacum]
Sequence

MPVNLTANAIPAIIAGDVNSKPVVQVLDIKLIGAAADRYGLLISDSESSQQAMLAAQLND
RVKTGRVRKTSVIQLIEYICTTVKNRKIIVVINMETIIPECEIIGNPKVLVESNFGAQKA
ISNGISGSAIFNNGNLSAQRSGQTSFANSNNLSSLNSGNSMQSYPPAIQPAYQPPPNYKS
HGTIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNSRGDGKVFSFDLLDSDG
GEIRVTCFNAVVDRFYDKIEAGKVYMISKGSLKPAQKNFNHLKNEWEIFLEITSTVDLCP
DEDNTIPRQQFSFRPISDIESAESNSIIDVIGIVIAVNPSVLILRKNGMETQRRILNLKD
QSGRSVELTLWGDFCNREGQKLQEMAEAGFSPVLAVKAAKVSDFTGKSIGTISSTQLFIG
PDFAEAQTLREWFDQGGKDVASQSISRENMPVGSKSEIRKTVSRIKDEGLGRSDKPDWIT
VKATITFIKTDSFYYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFEECDYRYLLQAQ
IQDHTGLTWVTAFQESGEEILGRPAKELHMMMNEEADDTRFSEIIRKCLFTQFLFRLKIK
EELYGDEQKVKITVIKAEKVKHSAESRYLLDLISKFRSS

Transcript Sequence

Gene sequence data has not been registered.